Publications

Publications published since 2010 from OUS - Department of Microbiology

922 publications found

Publications 2024

1. Alkaltham MF, Almansour AI, Arumugam N, Vagolu SK, Tønjum T, Alaqeel SI, Rajaratnam S, Sivaramakrishnan V (2024)
   Activity against Mycobacterium tuberculosis of a new class of spirooxindolopyrrolidine embedded chromanone hybrid heterocycles
   RSC Adv, 14 (17), 11604-11613
   DOI 10.1039/d4ra01501k, PubMed 38605893
2. Barratt-Due A, Pettersen K, Børresdatter-Dahl T, Holter JC, Grønli RH, Dyrhol-Riise AM, Lerum TV, Holten AR, Tonby K, Trøseid M, Skjønsberg OH, Granerud BK, Heggelund L, Kildal AB, Schjalm C, Aaløkken TM, Aukrust P, Ueland T, Mollnes TE, Halvorsen B, NOR‐Solidarity study groupThe Norwegian SARS‐CoV‐2 study group (2024)
   Escalated complement activation during hospitalization is associated with higher risk of 60-day mortality in SARS-CoV-2-infected patients
   J Intern Med (in press)
   DOI 10.1111/joim.13783, PubMed 38539241
3. Bordin DL, Grooms K, Montaldo NP, Fordyce Martin SL, Sætrom P, Samson LD, Bjørås M, van Loon B (2024)
   Loss of alkyladenine DNA glycosylase alters gene expression in the developing mouse brain and leads to reduced anxiety and improved memory
   DNA Repair (Amst), 135, 103632
   DOI 10.1016/j.dnarep.2024.103632, PubMed 38280242
4. Bugaj AM, Kunath N, Saasen VL, Fernandez-Berrocal MS, Vankova A, Sætrom P, Bjørås M, Ye J (2024)
   Dissecting gene expression networks in the developing hippocampus through the lens of NEIL3 depletion
   Prog Neurobiol, 235, 102599
   DOI 10.1016/j.pneurobio.2024.102599, PubMed 38522610
5. Bøås H, Havdal LB, Størdal K, Døllner H, Leegaard TM, Bekkevold T, Flem E, Inchley C, Nordbø SA, Rojahn AE, Debes S, Barstad B, Haarr E, Kran AB, Norwegian Enhanced Pediatric Immunisation Surveillance (NorEPIS) Network (2024)
   No association between disease severity and respiratory syncytial virus subtypes RSV-A and RSV-B in hospitalized young children in Norway
   PLoS One, 19 (3), e0298104
   DOI 10.1371/journal.pone.0298104, PubMed 38466702
6. Cao D, Jiang X, Wu T, Xiang Y, Liu J, Li Z, Yuan X, Bi K, Dong X, Tønjum T, Xu K, Zhang Y (2024)
   Identification of essential oils with strong activity against stationary phase Mycobacterium abscessus
   Heliyon, 10 (5), e27073
   DOI 10.1016/j.heliyon.2024.e27073, PubMed 38463856
7. Danielsen AS, Nygaard NJ, Børseth AW, Nilsen JV, Øvreness H, Raastad R, Borg MA, Kacelnik O, Bjørnholt JV (2024)
   Patient perspectives on infection prevention and control in cancer care: a survey of knowledge and attitudes among persons with cancer and their next of kin
   J Hosp Infect, 146, 21-30 (in press)
   DOI 10.1016/j.jhin.2024.01.012, PubMed 38311296
8. Ellingjord-Dale M, Brunvoll SH, Søraas A (2024)
   Prospective Memory Assessment before and after Covid-19
   N Engl J Med, 390 (9), 863-865
   DOI 10.1056/NEJMc2311200, PubMed 38416436
9. Fostervold A, Raffelsberger N, Hetland MAK, Bakksjø R, Bernhoff E, Samuelsen Ø, Sundsfjord A, Afset JE, Berntsen CF, Bævre-Jensen R, Ebbesen MH, Gammelsrud KW, Guleng AD, Handal N, Jakovljev A, Johal SK, Marvik Å, Natvik A, Sandnes RA, Tofteland S, Bjørnholt JV, Löhr IH, Assoc. on behalf of The Norwegian Study Group on Klebsiella pneumoniae (2024)
   Risk of death in Klebsiella pneumoniae bloodstream infections is associated with specific phylogenetic lineages
   J Infect, 88 (5), 106155 (in press)
   DOI 10.1016/j.jinf.2024.106155, PubMed 38574775
10. Helset E, Cheng V, Sporsem H, Thorstensen C, Nordøy I, Gammelsrud KW, Hanssen G, Ponzi E, Lipman J, von der Lippe E (2024)
    Meropenem pharmacokinetic/pharmacodynamic target attainment and clinical response in ICU patients: A prospective observational study
    Acta Anaesthesiol Scand, 68 (4), 502-511
    DOI 10.1111/aas.14376, PubMed 38286568
11. Holland P, Istre M, Ali MM, Gedde-Dahl T, Buechner J, Wildhagen M, Brunvoll SH, Horvath S, Matsuyama S, Dahl JA, Stölzel F, Søraas A (2024)
    Epigenetic aging of human blood cells is influenced by the age of the host body
    Aging Cell, e14112 (in press)
    DOI 10.1111/acel.14112, PubMed 38439206
12. Ianevski A, Frøysa IT, Lysvand H, Calitz C, Smura T, Schjelderup Nilsen HJ, Høyer E, Afset JE, Sridhar A, Wolthers KC, Zusinaite E, Tenson T, Kurg R, Oksenych V, Galabov AS, Stoyanova A, Bjørås M, Kainov DE (2024)
    The combination of pleconaril, rupintrivir, and remdesivir efficiently inhibits enterovirus infections in vitro, delaying the development of drug-resistant virus variants
    Antiviral Res, 224, 105842
    DOI 10.1016/j.antiviral.2024.105842, PubMed 38417531
13. Istvan P, Birkeland E, Avershina E, Kværner AS, Bemanian V, Pardini B, Tarallo S, de Vos WM, Rognes T, Berstad P, Rounge TB (2024)
    Exploring the gut DNA virome in fecal immunochemical test stool samples reveals associations with lifestyle in a large population-based study
    Nat Commun, 15 (1), 1791
    DOI 10.1038/s41467-024-46033-0, PubMed 38424056
14. Lång E, Lång A, Blicher P, Rognes T, Dommersnes PG, Bøe SO (2024)
    Topology-guided polar ordering of collective cell migration
    Sci Adv, 10 (16), eadk4825
    DOI 10.1126/sciadv.adk4825, PubMed 38630812
15. Midgard H, Malme KB, Pihl CM, Berg-Pedersen RM, Tanum L, Klundby I, Haug A, Tveter I, Bjørnestad R, Olsen IC, Finbråten AK, Dalgard O (2024)
    Opportunistic Treatment of Hepatitis C Infection Among Hospitalized People Who Inject Drugs (OPPORTUNI-C): A Stepped Wedge Cluster Randomized Trial
    Clin Infect Dis, 78 (3), 582-590
    DOI 10.1093/cid/ciad711, PubMed 37992203
16. Monshaugen I, Luna L, Rhodes J, Kristiansen FIS, Lång A, Bøe SO, Dutta A, Su Z, Klungland A, Ougland R (2024)
    Depletion of the m1A writer TRMT6/TRMT61A reduces proliferation and resistance against cellular stress in bladder cancer
    Front Oncol, 13, 1334112
    DOI 10.3389/fonc.2023.1334112, PubMed 38304034
17. Neurauter CG, Pannone M, Sousa MML, Wang W, Kuśnierczyk A, Luna L, Sætrom P, Scheffler K, Bjørås M (2024)
    Enhanced glutathione levels confer resistance to apoptotic and ferroptotic programmed cell death in NEIL DNA glycosylase deficient HAP1 cells
    Free Radic Biol Med, 213, 470-487
    DOI 10.1016/j.freeradbiomed.2024.01.037, PubMed 38301978
18. Oldereid TS, Jiang X, Øgaard J, Schrumpf E, Bjørnholt JV, Rasmussen H, Melum E (2024)
    Microbial exposure during early life regulates development of bile duct inflammation
    Scand J Gastroenterol, 59 (2), 192-201
    DOI 10.1080/00365521.2023.2278423, PubMed 37997753
19. Onken A, Moyo S, Miraji MK, Bohlin J, Marijani M, Manyahi J, Kibwana KO, Müller F, Jenum PA, Abeid KA, Reimers M, Langeland N, Mørch K, Blomberg B (2024)
    Predominance of multidrug-resistant Salmonella Typhi genotype 4.3.1 with low-level ciprofloxacin resistance in Zanzibar
    PLoS Negl Trop Dis, 18 (4), e0012132 (in press)
    DOI 10.1371/journal.pntd.0012132, PubMed 38630840
20. Simoes MP, Hodcroft EB, Simmonds P, Albert J, Alidjinou EK, Ambert-Balay K, Andrés C, Antón A, Auvray C, Bailly JL, Baldanti F, Bastings C, Beard S, Pereira CB, Berginc N, Bloemen M, Blomqvist S, Bosma F, Böttcher S, Bubba L, Buderus S, Cabrerizo M, Calvo C, Celma C, Ceriotti F et al. (2024)
    Epidemiological and clinical insights into the enterovirus D68 upsurge in Europe 2021/22 and the emergence of novel B3-derived lineages, ENPEN multicentre study
    J Infect Dis (in press)
    DOI 10.1093/infdis/jiae154, PubMed 38547499
21. Spruijtenburg B, de Souza Lima BJF, Tosar STG, Borman AM, Andersen CT, Nizamuddin S, Ahmad S, de Almeida Junior JN, Vicente VA, Nosanchuk JD, Buil JB, de Hoog S, Meijer EFJ, Meis JF, de Groot T (2024)
    The yeast genus Tardiomyces gen. nov. with one new species and two new combinations
    Infection (in press)
    DOI 10.1007/s15010-024-02229-6, PubMed 38573472
22. Søraas A, Brunvoll SH, Nygaard AB, Dahl JA, Ursin G (2024)
    Post-COVID-19 condition symptoms 6-12 months after hospitalisation in Wuhan
    Lancet, 403 (10434), 1336
    DOI 10.1016/S0140-6736(24)00414-8, PubMed 38582558
23. Wang HL, Siow R, Schmauck-Medina T, Zhang J, Sandset PM, Filshie C, Lund Ø, Partridge L, Bergersen LH, Juel Rasmussen L, Palikaras K, Sotiropoulos I, Storm-Mathisen J, Rubinsztein DC, Spillantini MG, De Zeeuw CI, Watne LO, Vyhnalek M, Veverova K, Liang KX, Tavernarakis N, Bohr VA, Yokote K, Saarela J, Nilsen H et al. (2024)
    Meeting Summary of The NYO3 5th NO-Age/AD Meeting and the 1st Norway-UK Joint Meeting on Aging and Dementia: Recent Progress on the Mechanisms and Interventional Strategies
    J Gerontol A Biol Sci Med Sci, 79 (4)
    DOI 10.1093/gerona/glae029, PubMed 38289789
24. Wang L, Hua Y, Bai X, Zhang J, Mernelius S, Chromek M, Frykman A, Hansson S, Matussek A (2024)
    Prevalence and Characteristics of Plasmid-Encoded Serine Protease EspP in Clinical Shiga Toxin-Producing Escherichia coli Strains from Patients in Sweden
    Microorganisms, 12 (3)
    DOI 10.3390/microorganisms12030589, PubMed 38543640
25. Yao Z, Jin S, Zhou F, Wang J, Wang K, Zou X (2024)
    A novel multiscale framework for delineating cancer evolution from subclonal compositions
    J Theor Biol, 582, 111743
    DOI 10.1016/j.jtbi.2024.111743, PubMed 38307450
26. Ørbo HS, Bjørlykke KH, Sexton J, Jyssum I, Tveter AT, Christensen IE, Mjaaland S, Kvien TK, Grødeland G, Kro GB, Jahnsen J, Haavardsholm EA, Munthe LA, Provan SA, Vaage JT, Goll GL, Jørgensen KK, Syversen SW (2024)
    Incidence and outcome of COVID-19 following vaccine and hybrid immunity in patients on immunosuppressive therapy: identification of protective post-immunisation anti-RBD antibody levels in a prospective cohort study
    RMD Open, 10 (2)
    DOI 10.1136/rmdopen-2023-003545, PubMed 38599653

Publications 2023

1. Al Rubaye M, Janice J, Bjørnholt JV, Kacelnik O, Haldorsen BC, Nygaard RM, Hegstad J, Sundsfjord A, Hegstad K, The Norwegian Vre Study Group (2023)
   The population structure of vancomycin-resistant and -susceptible Enterococcus faecium in a low-prevalence antimicrobial resistance setting is highly influenced by circulating global hospital-associated clones
   Microb Genom, 9 (12)
   DOI 10.1099/mgen.0.001160, PubMed 38112685
2. Al Rubaye M, Janice J, Bjørnholt JV, Löhr IH, Sundsfjord A, Hegstad K (2023)
   The first vanE-type vancomycin resistant Enterococcus faecalis isolates in Norway - phenotypic and molecular characteristics
   J Glob Antimicrob Resist, 36, 193-199
   DOI 10.1016/j.jgar.2023.12.021, PubMed 38154751
3. Bali N, Brennhaug SJ, Bjørås M, Bandyopadhyay S, Manaf A (2023)
   Optimized synthesis of polyacrylic acid-coated magnetic nanoparticles for high-efficiency DNA isolation and size selection
   RSC Adv, 13 (42), 29109-29120
   DOI 10.1039/d3ra04687g, PubMed 37800135
4. Battaglini D, White NM, Premraj L, Wanjiru Citarella B, Merson L, Robba C, Thomson D, Cho SM, ISARIC Clinical Characterization Group (2023)
   Long-term neurological symptoms after acute COVID-19 illness requiring hospitalization in adult patients: insights from the ISARIC-COVID-19 follow-up study
   J Neurol, 271 (1), 79-86
   DOI 10.1007/s00415-023-12133-y, PubMed 38055020
5. Blom KB, Birkeland GK, Midtvedt K, Jenssen TG, Reisæter AV, Rollag H, Hartmann A, Sagedal S, Sjaastad I, Tylden G, Njølstad G, Nilsen E, Christensen A, Åsberg A, Birkeland JA (2023)
   Cytomegalovirus High-risk Kidney Transplant Recipients Show No Difference in Long-term Outcomes Following Preemptive Versus Prophylactic Management
   Transplantation, 107 (8), 1846-1853
   DOI 10.1097/TP.0000000000004615, PubMed 37211633
6. Brendefur Corwin LM, Campbell P, Jakobsen K, Müller F, Lai X, Unemo M, Leegaard TM, Vildershøj Bjørnholt J, Olsen AO (2023)
   Improvement in Neisseria gonorrhoeae culture rates by bedside inoculation and incubation at a clinic for sexually transmitted infections
   Ann Clin Microbiol Antimicrob, 22 (1), 27
   DOI 10.1186/s12941-023-00576-0, PubMed 37072830
7. Camirand-Lemyre F, Merson L, Tirupakuzhi Vijayaraghavan BK, Burrell AJC, Citarella BW, Domingue MP, Lévesque S, Usuf E, Wils EJ, Ohshimo S, Martin-Loeches I, Sandulescu O, Laake JH, Lamontagne F, ISARIC Clinical Characterisation Group (2023)
   Implementation of Recommendations on the Use of Corticosteroids in Severe COVID-19
   JAMA Netw Open, 6 (12), e2346502
   DOI 10.1001/jamanetworkopen.2023.46502, PubMed 38147336
8. Cho SM, White N, Premraj L, Battaglini D, Fanning J, Suen J, Bassi GL, Fraser J, Robba C, Griffee M, Singh B, Citarella BW, Merson L, Solomon T, Thomson D, (2023)
   Neurological manifestations of COVID-19 in adults and children
   Brain, 146 (4), 1648-1661
   DOI 10.1093/brain/awac332, PubMed 36087305
9. Christensen I, Berild D, Bjørnholt JV, Jelsness-Jørgensen LP, Debes SM, Haug JB (2023)
   The Role of Procalcitonin as an Antimicrobial Stewardship Tool in Patients Hospitalized with Seasonal Influenza
   Antibiotics (Basel), 12 (3)
   DOI 10.3390/antibiotics12030573, PubMed 36978440
10. Cioetto-Mazzabò L, Boldrin F, Beauvineau C, Speth M, Marina A, Namouchi A, Segafreddo G, Cimino M, Favre-Rochex S, Balasingham S, Trastoy B, Munier-Lehmann H, Griffiths G, Gicquel B, Guerin ME, Manganelli R, Alonso-Rodríguez N (2023)
    SigH stress response mediates killing of Mycobacterium tuberculosis by activating nitronaphthofuran prodrugs via induction of Mrx2 expression
    Nucleic Acids Res, 51 (1), 144-165
    DOI 10.1093/nar/gkac1173, PubMed 36546765
11. Corwin LMB, Ingebretsen A, Campbell P, Alfsnes K, Müller F, Mauder N, Koomey M, Bjørnholt JV (2023)
    Fourier transform infrared spectroscopy; can it be used as a rapid typing method of Neisseria gonorrhoeae?
    J Microbiol Methods, 205, 106675
    DOI 10.1016/j.mimet.2023.106675, PubMed 36681126
12. COVID-19 Host Genetics Initiative (2023)
    A second update on mapping the human genetic architecture of COVID-19
    Nature, 621 (7977), E7-E26
    DOI 10.1038/s41586-023-06355-3, PubMed 37674002
13. Danielsen AS, Elstrøm P, Eriksen-Volle HM, Hofvind S, Eyre DW, Kacelnik O, Bjørnholt JV (2023)
    The epidemiology of multidrug-resistant organisms in persons diagnosed with cancer in Norway, 2008-2018: expanding surveillance using existing laboratory and register data
    Eur J Clin Microbiol Infect Dis, 43 (1), 121-132
    DOI 10.1007/s10096-023-04698-3, PubMed 37980302
14. Danielsen AS, Franconeri L, Page S, Myhre AE, Tornes RA, Kacelnik O, Bjørnholt JV (2023)
    Clinical outcomes of antimicrobial resistance in cancer patients: a systematic review of multivariable models
    BMC Infect Dis, 23 (1), 247
    DOI 10.1186/s12879-023-08182-3, PubMed 37072711
15. Debelius JW, Engstrand L, Matussek A, Brusselaers N, Morton JT, Stenmarker M, Olsen RS (2023)
    The Local Tumor Microbiome Is Associated with Survival in Late-Stage Colorectal Cancer Patients
    Microbiol Spectr, 11 (3), e0506622
    DOI 10.1128/spectrum.05066-22, PubMed 37042765
16. Debes S, Haug JB, De Blasio BF, Lindstrøm JC, Jonassen CM, Dudman SG (2023)
    Antibiotic Consumption in a Cohort of Hospitalized Adults with Viral Respiratory Tract Infection
    Antibiotics (Basel), 12 (4)
    DOI 10.3390/antibiotics12040788, PubMed 37107150
17. Durfee C, Temiz NA, Levin-Klein R, Argyris PP, Alsøe L, Carracedo S, Alonso de la Vega A, Proehl J, Holzhauer AM, Seeman ZJ, Liu X, Lin YT, Vogel RI, Sotillo R, Nilsen H, Harris RS (2023)
    Human APOBEC3B promotes tumor development in vivo including signature mutations and metastases
    Cell Rep Med, 4 (10), 101211
    DOI 10.1016/j.xcrm.2023.101211, PubMed 37797615
18. Durfee C, Temiz NA, Levin-Klein R, Argyris PP, Alsøe L, Carracedo S, de la Vega AA, Proehl J, Holzhauer AM, Seeman ZJ, Lin YT, Vogel RI, Sotillo R, Nilsen H, Harris RS (2023)
    Human APOBEC3B promotes tumor heterogeneity in vivo including signature mutations and metastases
    bioRxiv
    DOI 10.1101/2023.02.24.529970, PubMed 36865194
19. Fagerhol MK, Schultz NH, Mirlashari MR, Wiedmann MKH, Nissen-Meyer LSH, Søraas AVL, Hetland G (2023)
    DNase analysed by a novel competitive assay in patients with complications after ChAdOx1 nCoV-19 vaccination and in normal unvaccinated blood donors
    Scand J Immunol, 98 (1), e13274
    DOI 10.1111/sji.13274, PubMed 37676118
20. Federico L, Tvedt THA, Gainullin M, Osen JR, Chaban V, Lund KP, Tietze L, Tran TT, Lund-Johansen F, Kared H, Lind A, Vaage JT, Stratford R, Tennøe S, Malone B, Clancy T, Myhre AEL, Gedde-Dahl T, Munthe LA (2023)
    Robust spike-specific CD4⁺ and CD8⁺ T cell responses in SARS-CoV-2 vaccinated hematopoietic cell transplantation recipients: a prospective, cohort study
    Front Immunol, 14, 1210899
    DOI 10.3389/fimmu.2023.1210899, PubMed 37503339
21. Fernandez JL, Årbogen S, Sadeghinia MJ, Haram M, Snipstad S, Torp SH, Einen C, Mühlenpfordt M, Maardalen M, Vikedal K, Davies CL (2023)
    A Comparative Analysis of Orthotopic and Subcutaneous Pancreatic Tumour Models: Tumour Microenvironment and Drug Delivery
    Cancers (Basel), 15 (22)
    DOI 10.3390/cancers15225415, PubMed 38001675
22. Floeystad HK, Holter JC, Husebye E, Siljan WW, Berild D, Holm AM, Heggelund L (2023)
    Nausea Predicts Bacteremia in Immunocompetent Patients with Pneumococcal Community-Acquired Pneumonia: Secondary Data Analysis from a Prospective Cohort
    J Clin Med, 12 (12)
    DOI 10.3390/jcm12123924, PubMed 37373619
23. Garcia I, Lee Y, Brynildsrud O, Eldholm V, Magnus P, Blomfeldt A, Leegaard TM, Müller F, Dudman S, Caugant DA (2023)
    Tracing the adaptive evolution of SARS-CoV-2 during vaccine roll-out in Norway
    Virus Evol, 10 (1), vead081
    DOI 10.1093/ve/vead081, PubMed 38205440
24. Girase RT, Ahmad I, Oh JM, Kim H, Mathew B, Vagolu SK, Tønjum T, Desai NC, Sriram D, Kumari J, Patel HM (2023)
    Repurposing Azoles to Resolve Serotogenic Toxicity Associated with Linezolid to Combat Multidrug-Resistant Tuberculosis
    ACS Med Chem Lett, 14 (12), 1754-1759
    DOI 10.1021/acsmedchemlett.3c00406, PubMed 38116435
25. Gonçalves BP, Jassat W, Baruch J, Hashmi M, Rojek A, Dasgupta A, Martin-Loeches I, Reyes LF, Piubelli C, Citarella BW, Kartsonaki C, Lefèvre B, López Revilla JW, Lunn M, Harrison EM, Kraemer MUG, Shrapnel S, Horby P, Bisoffi Z, Olliaro PL, Merson L, ISARIC Clinical Characterisation Group (2023)
    A multi-country analysis of COVID-19 hospitalizations by vaccination status
    Med, 4 (11), 797-812.e2
    DOI 10.1016/j.medj.2023.08.005, PubMed 37738979
26. Griffee MJ, Bozza PT, Reyes LF, Eddington DP, Rosenberger D, Merson L, Citarella BW, Fanning JP, Alexander PMA, Fraser J, Dalton H, Cho SM, ISARIC Clinical Characterisation Group (2023)
    Thrombotic and hemorrhagic complications of COVID-19 in adults hospitalized in high-income countries compared with those in adults hospitalized in low- and middle-income countries in an international registry
    Res Pract Thromb Haemost, 7 (5), 102142
    DOI 10.1016/j.rpth.2023.102142, PubMed 37601011
27. Guneykaya D, Ugursu B, Logiacco F, Popp O, Feiks MA, Meyer N, Wendt S, Semtner M, Cherif F, Gauthier C, Madore C, Yin Z, Çınar Ö, Arslan T, Gerevich Z, Mertins P, Butovsky O, Kettenmann H, Wolf SA (2023)
    Sex-specific microglia state in the Neuroligin-4 knock-out mouse model of autism spectrum disorder
    Brain Behav Immun, 111, 61-75
    DOI 10.1016/j.bbi.2023.03.023, PubMed 37001827
28. Hegstad K, Pöntinen AK, Bjørnholt JV, Quist-Paulsen E, Sundsfjord A (2023)
    The first tigecycline resistant Enterococcus faecium in Norway was related to tigecycline exposure
    J Glob Antimicrob Resist, 36, 112-115
    DOI 10.1016/j.jgar.2023.12.002, PubMed 38122982
29. Heim AVBT, Janice J, Bjørnholt JV, Lunestad BT, Hegstad K, Svanevik CS (2023)
    Genomic insights into Enterococcus faecium isolates from marine bivalves highlight One Health concerns and healthcare linkages
    Microb Genom, 9 (12)
    DOI 10.1099/mgen.0.001154, PubMed 38085805
30. Hole MJ, Jørgensen KK, Holm K, Braadland PR, Meyer-Myklestad MH, Medhus AW, Reikvam DH, Götz A, Grzyb K, Boberg KM, Karlsen TH, Kummen M, Hov JR (2023)
    A shared mucosal gut microbiota signature in primary sclerosing cholangitis before and after liver transplantation
    Hepatology, 77 (3), 715-728
    DOI 10.1002/hep.32773, PubMed 36056902
31. Hole MJ, Jørgensen KK, Holm K, Braadland PR, Meyer-Myklestad MH, Medhus AW, Reikvam DH, Götz A, Grzyb K, Boberg KM, Karlsen TH, Kummen M, Hov JR (2023)
    Reply: The mucosal gut signature in primary sclerosing cholangitis before and after liver transplantation. Is the dysbiosis index really predictive for the recurrence of PSC?
    Hepatology, 77 (6), E188-E189
    DOI 10.1097/HEP.0000000000000340, PubMed 36815351
32. Isachesku E, Braicu C, Pirlog R, Kocijancic A, Busuioc C, Pruteanu LL, Pandey DP, Berindan-Neagoe I (2023)
    The Role of Non-Coding RNAs in Epigenetic Dysregulation in Glioblastoma Development
    Int J Mol Sci, 24 (22)
    DOI 10.3390/ijms242216320, PubMed 38003512
33. Jiang X, Liu S, Fu YR, Liu XJ, Li XJ, Yang B, Jiang HF, Shen ZZ, Alemu EA, Vazquez P, Tang Y, Kaarbø M, McVoy MA, Rayner S, Luo MH (2023)
    Human cytomegalovirus infection perturbs neural progenitor cell fate via the expression of viral microRNAs
    J Med Virol, 95 (2), e28574
    DOI 10.1002/jmv.28574, PubMed 36772841
34. Kalyanasundaram S, Lefol Y, Gundersen S, Rognes T, Alsøe L, Nilsen HL, Hovig E, Sandve GK, Domanska D (2023)
    hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks
    PLoS One, 18 (7), e0286330
    DOI 10.1371/journal.pone.0286330, PubMed 37467208
35. Kared H, Alirezaylavasani A, Lund KP, Chopra A, Tietze L, de Matos Kasahara T, Goll GL, Grødeland G, Kaarbø M, Reisæter AV, Hovd M, Heldal K, Vaage JT, Lund-Johansen F, Midtvedt K, Åsberg A, Munthe LA (2023)
    Hybrid and SARS-CoV-2-vaccine immunity in kidney transplant recipients
    EBioMedicine, 97, 104833
    DOI 10.1016/j.ebiom.2023.104833, PubMed 37844534
36. Kartsonaki C, Baillie JK, Barrio NG, Baruch J, Beane A, Blumberg L, Bozza F, Broadley T, Burrell A, Carson G, Citarella BW, Dagens A, Dankwa EA, Donnelly CA, Dunning J, Elotmani L, Escher M, Farshait N, Goffard JC, Gonçalves BP, Hall M, Hashmi M, Sim Lim Heng B, Ho A, Jassat W et al. (2023)
    Characteristics and outcomes of an international cohort of 600 000 hospitalized patients with COVID-19
    Int J Epidemiol, 52 (2), 355-376
    DOI 10.1093/ije/dyad012, PubMed 36850054
37. Lefol Y, Korfage T, Mjelle R, Prebensen C, Lüders T, Müller B, Krokan H, Sarno A, Alsøe L, CONSORTIUM LEMONAID, Berdal JE, Sætrom P, Nilsen H, Domanska D (2023)
    TiSA: TimeSeriesAnalysis-a pipeline for the analysis of longitudinal transcriptomics data
    NAR Genom Bioinform, 5 (1), lqad020
    DOI 10.1093/nargab/lqad020, PubMed 36879899
38. Li Y, Wang Y, Vera-Rodriguez M, Lindeman LC, Skuggen LE, Rasmussen EMK, Jermstad I, Khan S, Fosslie M, Skuland T, Indahl M, Khodeer S, Klemsdal EK, Jin KX, Dalen KT, Fedorcsak P, Greggains GD, Lerdrup M, Klungland A, Au KF, Dahl JA (2023)
    Single-cell m⁶A mapping in vivo using picoMeRIP-seq
    Nat Biotechnol, 42 (4), 591-596
    DOI 10.1038/s41587-023-01831-7, PubMed 37349523
39. Lin X, Wang W, Yang M, Damseh N, de Sousa MML, Jacob F, Lång A, Kristiansen E, Pannone M, Kissova M, Almaas R, Kuśnierczyk A, Siller R, Shahrour M, Al-Ashhab M, Abu-Libdeh B, Tang W, Slupphaug G, Elpeleg O, Bøe SO, Eide L, Sullivan GJ, Rinholm JE, Song H, Ming GL et al. (2023)
    A loss-of-function mutation in human Oxidation Resistance 1 disrupts the spatial-temporal regulation of histone arginine methylation in neurodevelopment
    Genome Biol, 24 (1), 216
    DOI 10.1186/s13059-023-03037-1, PubMed 37773136
40. Lirussi L, Nilsen HL (2023)
    DNA Glycosylases Define the Outcome of Endogenous Base Modifications
    Int J Mol Sci, 24 (12)
    DOI 10.3390/ijms241210307, PubMed 37373453
41. Liu Q, Yang X, Sun H, Wang H, Sui X, Zhang P, Bai X, Xiong Y (2023)
    Genetic Diversity and Expression of Intimin in Escherichia albertii Isolated from Humans, Animals, and Food
    Microorganisms, 11 (12)
    DOI 10.3390/microorganisms11122843, PubMed 38137987
42. Matussek A, Mernelius S, Chromek M, Zhang J, Frykman A, Hansson S, Georgieva V, Xiong Y, Bai X (2023)
    Genome-wide association study of hemolytic uremic syndrome causing Shiga toxin-producing Escherichia coli from Sweden, 1994-2018
    Eur J Clin Microbiol Infect Dis, 42 (6), 771-779
    DOI 10.1007/s10096-023-04600-1, PubMed 37103716
43. Meyer S, Blaas I, Bollineni RC, Delic-Sarac M, Tran TT, Knetter C, Dai KZ, Madssen TS, Vaage JT, Gustavsen A, Yang W, Nissen-Meyer LSH, Douvlataniotis K, Laos M, Nielsen MM, Thiede B, Søraas A, Lund-Johansen F, Rustad EH, Olweus J (2023)
    Prevalent and immunodominant CD8 T cell epitopes are conserved in SARS-CoV-2 variants
    Cell Rep, 42 (1), 111995
    DOI 10.1016/j.celrep.2023.111995, PubMed 36656713
44. Mikkelsen TF, Vera-Rodriguez M, Greggains G, Fedorcsák P, Hald K (2023)
    Effect of endometrial biopsy method on ribonucleic acid quality and gene expression analysis in patients with leiomyoma
    F S Rep, 5 (1), 72-79
    DOI 10.1016/j.xfre.2023.11.006, PubMed 38524201
45. Misceo D, Lirussi L, Strømme P, Sumathipala D, Guerin A, Wolf NI, Server A, Stensland M, Dalhus B, Tolun A, Kroes HY, Nyman TA, Nilsen HL, Frengen E (2023)
    A homozygous POLR1A variant causes leukodystrophy and affects protein homeostasis
    Brain, 146 (8), 3513-3527
    DOI 10.1093/brain/awad086, PubMed 36917474
46. Mohn KG, Bredholt G, Onyango TB, Brokstad KA, Zhou F, Holter JC, Tonby K, Dyrhol-Riise AM, Cox RJ, Bergen COVID-19 Research Group, Norwegian SARS-CoV-2 Study Group (2023)
    SARS-CoV-2 infection induces long-lived B and T-cell responses up to 15 months post-infection, irrespective of disease severity
    J Infect, 87 (4), 346-349
    DOI 10.1016/j.jinf.2023.05.023, PubMed 37295510
47. Murphy SL, Halvorsen B, Holter JC, Huse C, Tveita A, Trøseid M, Hoel H, Kildal AB, Holten AR, Lerum TV, Skjønsberg OH, Michelsen AE, Aaløkken TM, NOR-SOLIDARITY Consortium, The Norwegian SARS-CoV-2 study group investigators, Tonby K, Lind A, Dudman S, Granerud BK, Heggelund L, Bøe S, Dyrholt-Riise AM, Aukrust P, Barratt-Due A, Ueland T, Dahl TB (2023)
    Circulating markers of extracellular matrix remodelling in severe COVID-19 patients
    J Intern Med, 294 (6), 784-797
    DOI 10.1111/joim.13725, PubMed 37718572
48. Nissen-Meyer LSH, Macpherson ME, Skeie LG, Hvalryg M, Llohn AH, Steinsvåg TT, Fenstad MH, Tveita A, Kristoffersen EK, Sundic T, Lund-Johansen F, Vaage JT, Flesland Ø, Dyrhol-Riise AM, Holter JC, Hervig TA, Fevang B (2023)
    COVID-19 patients treated with convalescent plasma
    Tidsskr Nor Laegeforen, 143 (11)
    DOI 10.4045/tidsskr.22.0577, PubMed 37589359
49. Nissen-Meyer LSH, Steinsvåg TT, Fenstad MH, Sørvoll IH, Hvalryg M, Titze TL, Magnussen K, Kristoffersen G, Johnsen KMN, Llohn AH, Hermundstad B, Høiback LS, Haugen M, Kristoffersen EK, Boulland LML, Kran AB, Lund-Johansen F, Vaage JT, Flesland Ø, Hervig TA (2023)
    Convalescent plasma from Norwegian blood donors to treat COVID-19
    Tidsskr Nor Laegeforen, 143 (11)
    DOI 10.4045/tidsskr.22.0180, PubMed 37589362
50. Oldereid TS, Jiang X, Nordhus KS, Ponzetta A, Bjørnholt JV, Björkström NK, Melum E, Rasmussen H (2023)
    Role of bacteria and microbial metabolites in immune modulation during early life
    Scand J Immunol, 99 (2), e13336
    DOI 10.1111/sji.13336, PubMed 38441196
51. Oppen K, Brede C, Skadberg Ø, Steinsvik T, Holter JC, Michelsen AE, Heggelund L (2023)
    Hepcidin analysis in pneumonia: Comparison of immunoassay and LC-MS/MS
    Ann Clin Biochem, 60 (5), 298-305
    DOI 10.1177/00045632231159529, PubMed 36759502
52. Presterud R, Deng WH, Wennerström AB, Burgers T, Gajera B, Mattsson K, Solberg A, Fang EF, Nieminen AI, Stray-Pedersen A, Nilsen H (2023)
    Long-Term Nicotinamide Riboside Use Improves Coordination and Eye Movements in Ataxia Telangiectasia
    Mov Disord, 39 (2), 360-369
    DOI 10.1002/mds.29645, PubMed 37899683
53. Qian S, He H, Xiong X, Ai R, Wang W, Zhu H, Ye Q, Zhou S, Nilsen H, Xie C (2023)
    Identification of mitophagy-associated proteins profile as potential plasma biomarkers of idiopathic Parkinson's disease
    CNS Neurosci Ther (in press)
    DOI 10.1111/cns.14532, PubMed 37990436
54. Quiles-Jiménez A, Sousa MML, Huse C, Dyrhol-Riise AM, Holter JC, Christensen EE, Tonby K, Holten AR, Aukrust P, Bjørås M, Dahl TB, Halvorsen B (2023)
    Severely ill COVID-19 patients have altered circulating levels of proteins controlling the epitranscriptome
    J Infect, 86 (6), 593-595
    DOI 10.1016/j.jinf.2023.03.002, PubMed 36889510
55. Radenkovic S, Laerdahl JK, Backe PH, Morava E (2023)
    The role of PGM1isoform 2 in PGM1-CDG: One step closer to genotype-phenotype correlation?
    J Inherit Metab Dis, 46 (2), 159-160
    DOI 10.1002/jimd.12601, PubMed 36843136
56. Ramos-Alonso L, Holland P, Le Gras S, Zhao X, Jost B, Bjørås M, Barral Y, Enserink JM, Chymkowitch P (2023)
    Mitotic chromosome condensation resets chromatin to safeguard transcriptional homeostasis during interphase
    Proc Natl Acad Sci U S A, 120 (4), e2210593120
    DOI 10.1073/pnas.2210593120, PubMed 36656860
57. Ravlo E, Ianevski A, Starheim E, Wang W, Ji P, Lysvand H, Smura T, Kivi G, Voolaid ML, Plaan K, Ustav M, Ustav M, Zusinaite E, Tenson T, Kurg R, Oksenych V, Walstad K, Nordbø SA, Kaarbø M, Ernits K, Bjørås M, Kainov DE, Fenstad MH (2023)
    Boosted production of antibodies that neutralized different SARS-CoV-2 variants in a COVID-19 convalescent following messenger RNA vaccination - a case study
    Int J Infect Dis, 137, 75-78
    DOI 10.1016/j.ijid.2023.10.011, PubMed 37852599
58. Ravlo E, Sousa MML, Andersen LL, Holberg-Petersen M, Klundby I, Aas PA, Hagen L, Erlandsen SE, Malmring JF, Ali Z, Sharma A, Ottesen V, Bandyopadhyay S, Bjørås M (2023)
    A fast, low-cost, robust and high-throughput method for viral nucleic acid isolation based on NAxtra magnetic nanoparticles
    Sci Rep, 13 (1), 11714
    DOI 10.1038/s41598-023-38743-0, PubMed 37474666
59. Ravn C, Neyt J, Benito N, Abreu MA, Achermann Y, Bozhkova S, Coorevits L, Ferrari MC, Gammelsrud KW, Gerlach UJ, Giannitsioti E, Gottliebsen M, Jørgensen NP, Madjarevic T, Marais L, Menon A, Moojen DJ, Pääkkönen M, Pokorn M, Pérez-Prieto D, Renz N, Saavedra-Lozano J, Sabater-Martos M, Sendi P, Tevell S et al. (2023)
    Guideline for management of septic arthritis in native joints (SANJO)
    J Bone Jt Infect, 8 (1), 29-37
    DOI 10.5194/jbji-8-29-2023, PubMed 36756304
60. Reyes LF, Garcia-Gallo E, Murthy S, Fuentes YV, Serrano CC, Ibáñez-Prada ED, Lee J, Rojek A, Citarella BW, Gonçalves BP, Dunning J, Rätsep I, Viñan-Garces AE, Kartsonaki C, Rello J, Martin-Loeches I, Shankar-Hari M, Olliaro PL, Merson L, ISARIC Characterisation Group (2023)
    Major adverse cardiovascular events (MACE) in patients with severe COVID-19 registered in the ISARIC WHO clinical characterization protocol: A prospective, multinational, observational study
    J Crit Care, 77, 154318
    DOI 10.1016/j.jcrc.2023.154318, PubMed 37167775
61. Rodríguez-Temporal D, Herrera L, Alcaide F, Domingo D, Héry-Arnaud G, van Ingen J, Van den Bossche A, Ingebretsen A, Beauruelle C, Terschlüsen E, Boarbi S, Vila N, Arroyo MJ, Méndez G, Muñoz P, Mancera L, Ruiz-Serrano MJ, Rodríguez-Sánchez B (2023)
    Identification of Mycobacterium abscessus Subspecies by MALDI-TOF Mass Spectrometry and Machine Learning
    J Clin Microbiol, 61 (1), e0111022
    DOI 10.1128/jcm.01110-22, PubMed 36602341
62. Rumbavicius I, Rounge TB, Rognes T (2023)
    HoCoRT: host contamination removal tool
    BMC Bioinformatics, 24 (1), 371
    DOI 10.1186/s12859-023-05492-w, PubMed 37784008
63. Sarkar S, Mayer Bridwell AE, Good JAD, Wang ER, McKee SR, Valenta J, Harrison GA, Flentie KN, Henry FL, Wixe T, Demirel P, Vagolu SK, Chatagnon J, Machelart A, Brodin P, Tønjum T, Stallings CL, Almqvist F (2023)
    Design, Synthesis, and Evaluation of Novel Δ²-Thiazolino 2-Pyridone Derivatives That Potentiate Isoniazid Activity in an Isoniazid-Resistant Mycobacterium tuberculosis Mutant
    J Med Chem, 66 (16), 11056-11077
    DOI 10.1021/acs.jmedchem.3c00358, PubMed 37485869
64. Schiavi A, Salveridou E, Brinkmann V, Shaik A, Menzel R, Kalyanasundaram S, Nygård S, Nilsen H, Ventura N (2023)
    Mitochondria hormesis delays aging and associated diseases in Caenorhabditis elegans impacting on key ferroptosis players
    iScience, 26 (4), 106448
    DOI 10.1016/j.isci.2023.106448, PubMed 37020951
65. Shah N, Xue B, Xu Z, Yang H, Marwali E, Dalton H, Payne PPR, Lu C, Said AS, ISARIC Clinical Characterisation Group (2023)
    Validation of extracorporeal membrane oxygenation mortality prediction and severity of illness scores in an international COVID-19 cohort
    Artif Organs, 47 (9), 1490-1502
    DOI 10.1111/aor.14542, PubMed 37032544
66. Shrestha SK, Shrestha J, Strand TA, Numanovic S, Andreassen AK, Dembinski JL, Vikse R, Dudman SG (2023)
    The Molecular Epidemiology of Enterovirus in a Birth Cohort in Nepal
    Microbiology Research, 14 (3), 909-917
    DOI 10.3390/microbiolres14030063, PublikaID 475
67. Skagseth H, Danielsen AS, Kacelnik O, Trondsen UJ, Berg TC, Sorknes NK, Eriksen-Volle HM (2023)
    Clusters of healthcare-associated SARS-CoV-2 infections in Norwegian hospitals detected by a fully automatic register-based surveillance system
    J Hosp Infect, 135, 50-54
    DOI 10.1016/j.jhin.2023.02.014, PubMed 36913981
68. Sleiman A, Lalanne K, Vianna F, Perrot Y, Richaud M, SenGupta T, Cardot-Martin M, Pedini P, Picard C, Nilsen H, Galas S, Adam-Guillermin C (2023)
    Targeted Central Nervous System Irradiation with Proton Microbeam Induces Mitochondrial Changes in Caenorhabditis elegans
    Biology (Basel), 12 (6)
    DOI 10.3390/biology12060839, PubMed 37372124
69. Starheim EJ, Ravlo E, Schjølberg JO, Solvang V, Wang W, Scrimgeour NR, Manaf A, Erlandsen SE, Aas PA, Hagen L, de Sousa MML, Bjørås M (2023)
    NAxtra magnetic nanoparticles for low-cost, efficient isolation of mammalian DNA and RNA
    Sci Rep, 13 (1), 20836
    DOI 10.1038/s41598-023-46868-5, PubMed 38012172
70. Strøm TB, Asprusten E, Laerdahl JK, Øygard I, Hussain MM, Bogsrud MP, Leren TP (2023)
    Missense mutation Q384K in the APOB gene affecting the large lipid transfer module of apoB reduces the secretion of apoB-100 in the liver without reducing the secretion of apoB-48 in the intestine
    J Clin Lipidol, 17 (6), 800-807
    DOI 10.1016/j.jacl.2023.08.009, PubMed 37718180
71. Sui X, Yang X, Luo M, Wang H, Liu Q, Sun H, Jin Y, Wu Y, Bai X, Xiong Y (2023)
    Characteristics of Shiga Toxin-Producing Escherichia coli Circulating in Asymptomatic Food Handlers
    Toxins (Basel), 15 (11)
    DOI 10.3390/toxins15110640, PubMed 37999503
72. Sæbø IP, Bjørås M, Franzyk H, Helgesen E, Booth JA (2023)
    Optimization of the Hemolysis Assay for the Assessment of Cytotoxicity
    Int J Mol Sci, 24 (3)
    DOI 10.3390/ijms24032914, PubMed 36769243
73. Tangeraas T, Constante JR, Backe PH, Oyarzábal A, Neugebauer J, Weinhold N, Boemer F, Debray FG, Ozturk-Hism B, Evren G, Tuba EF, Ummuhan O, Footitt E, Davison J, Martinez C, Bueno C, Machado I, Rodríguez-Pombo P, Al-Sannaa N, De Los Santos M, López JM, Ozturkmen-Akay H, Karaca M, Tekin M, Pajares S et al. (2023)
    BCKDK deficiency: a treatable neurodevelopmental disease amenable to newborn screening
    Brain, 146 (7), 3003-3013
    DOI 10.1093/brain/awad010, PubMed 36729635
74. Tedbury PR, Manfredi C, Degenhardt F, Conway J, Horwath MC, McCracken C, Sorscher AJ, Moreau S, Wright C, Edwards C, Brewer J, Guarner J, de Wit E, Williamson BN, Suthar MS, Ong YT, Roback JD, Alter DN, Holter JC, Karlsen TH, Sacchi N, Romero-Gómez M, Invernizzi P, Fernández J, Buti M et al. (2023)
    Mechanisms by which the cystic fibrosis transmembrane conductance regulator may influence SARS-CoV-2 infection and COVID-19 disease severity
    FASEB J, 37 (11), e23220
    DOI 10.1096/fj.202300077R, PubMed 37801035
75. Thorfinnsdottir LB, Bø GH, Booth JA, Bruheim P (2023)
    Survival of Escherichia coli after high-antibiotic stress is dependent on both the pregrown physiological state and incubation conditions
    Front Microbiol, 14, 1149978
    DOI 10.3389/fmicb.2023.1149978, PubMed 36970700
76. Tirpe A, Streianu C, Tirpe SM, Kocijancic A, Pirlog R, Pirlog B, Busuioc C, Pop OL, Berindan-Neagoe I (2023)
    The Glioblastoma CircularRNAome
    Int J Mol Sci, 24 (19)
    DOI 10.3390/ijms241914545, PubMed 37833993
77. Tirupakuzhi Vijayaraghavan BK, Bishnu S, Baruch J, Citarella BW, Kartsonaki C, Meeyai A, Mohamed Z, Ohshimo S, Lefèvre B, Al-Fares A, Calvache JA, Taccone FS, Olliaro P, Merson L, Adhikari NKJ, ISARIC Clinical Characterisation Group (2023)
    Liver injury in hospitalized patients with COVID-19: An International observational cohort study
    PLoS One, 18 (9), e0277859
    DOI 10.1371/journal.pone.0277859, PubMed 37703268
78. Tislevoll BS, Hellesøy M, Fagerholt OHE, Gullaksen SE, Srivastava A, Birkeland E, Kleftogiannis D, Ayuda-Durán P, Piechaczyk L, Tadele DS, Skavland J, Baliakas P, Hovland R, Andresen V, Seternes OM, Tvedt THA, Aghaeepour N, Gavasso S, Porkka K, Jonassen I, Fløisand Y, Enserink J, Blaser N, Gjertsen BT (2023)
    Author Correction: Early response evaluation by single cell signaling profiling in acute myeloid leukemia
    Nat Commun, 14 (1), 1767
    DOI 10.1038/s41467-023-37488-8, PubMed 36997540
79. Tran TT, Vaage EB, Mehta A, Chopra A, Tietze L, Kolderup A, Anthi A, König M, Nygaard G, Lind A, Müller F, Nissen-Meyer LS, Magnus P, Trogstad L, Mjaaland S, Søraas A, Midtvedt K, Åsberg A, Barratt-Due A, Medhus AW, Høivik ML, Lundin K, Karlsen RF, Dahle R, Danielsson K et al. (2023)
    Author Correction: Titers of antibodies against ancestral SARS-CoV-2 correlate with levels of neutralizing antibodies to multiple variants
    NPJ Vaccines, 8 (1), 4
    DOI 10.1038/s41541-023-00600-6, PubMed 36697432
80. Trøseid M, Holter JC, Holm K, Vestad B, Sazonova T, Granerud BK, Dyrhol-Riise AM, Holten AR, Tonby K, Kildal AB, Heggelund L, Tveita A, Bøe S, Müller KE, Jenum S, Hov JR, Ueland T, Norwegian SARS-CoV-2 study group (2023)
    Gut microbiota composition during hospitalization is associated with 60-day mortality after severe COVID-19
    Crit Care, 27 (1), 69
    DOI 10.1186/s13054-023-04356-2, PubMed 36814280
81. Wainstein M, Spyrison N, Dai D, Ghadimi M, Chávez-Iñiguez JS, Rizo-Topete L, Citarella BW, Merson L, Pole JD, Claure-Del Granado R, Johnson DW, Shrapnel S, ISARIC Characterization Group (2023)
    Association of Country Income Level With the Characteristics and Outcomes of Critically Ill Patients Hospitalized With Acute Kidney Injury and COVID-19
    Kidney Int Rep, 8 (8), 1514-30 (in press)
    DOI 10.1016/j.ekir.2023.05.015, PubMed 37360820
82. Wang L, Bai X, Ylinen E, Zhang J, Saxén H, Matussek A (2023)
    Genetic Characterization of Intimin Gene (eae) in Clinical Shiga Toxin-Producing Escherichia coli Strains from Pediatric Patients in Finland
    Toxins (Basel), 15 (12)
    DOI 10.3390/toxins15120669, PubMed 38133173
83. Wang Y, Li Y, Skuland T, Zhou C, Li A, Hashim A, Jermstad I, Khan S, Dalen KT, Greggains GD, Klungland A, Dahl JA, Au KF (2023)
    The RNA m⁶A landscape of mouse oocytes and preimplantation embryos
    Nat Struct Mol Biol, 30 (5), 703-709
    DOI 10.1038/s41594-023-00969-x, PubMed 37081317
84. Watne LO, Pollmann CT, Neerland BE, Quist-Paulsen E, Halaas NB, Idland AV, Hassel B, Henjum K, Knapskog AB, Frihagen F, Raeder J, Godø A, Ueland PM, McCann A, Figved W, Selbæk G, Zetterberg H, Fang EF, Myrstad M, Giil LM (2023)
    Cerebrospinal fluid quinolinic acid is strongly associated with delirium and mortality in hip-fracture patients
    J Clin Invest, 133 (2)
    DOI 10.1172/JCI163472, PubMed 36409557
85. Yang M, Ali O, Bjørås M, Wang J (2023)
    Identifying functional regulatory mutation blocks by integrating genome sequencing and transcriptome data
    iScience, 26 (8), 107266
    DOI 10.1016/j.isci.2023.107266, PubMed 37520692
86. Yang X, Sui X, Liu Q, Wang H, Sun H, Bai X, Xiong Y (2023)
    Characterization of the novel temperate Escherichia coli phage phiStx2k
    Arch Virol, 169 (1), 5
    DOI 10.1007/s00705-023-05941-0, PubMed 38078984
87. Yao Y, Sun H, Wurihan, Gegeheng, Gezi, Skarstad K, Fan L, Morigen (2023)
    A DnaA‐dependent riboswitch for transcription attenuation of the his operon
    mLife, 2 (2), 126-140
    DOI 10.1002/mlf2.12075, PublikaID 479
88. Zhao H, Li J, Bøe SO, Zuo R, Zhu P (2023)
    Editorial: Novel ligands and receptors in endocrine disorders
    Front Cell Dev Biol, 11, 1218271
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89. Ølnes ÅS, Teigen M, Laerdahl JK, Leren TP, Strøm TB, Bjune K (2023)
    Variants in the CETP gene affect levels of HDL cholesterol by reducing the amount, and not the specific lipid transfer activity, of secreted CETP
    PLoS One, 18 (12), e0294764
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90. Øverbø J, Aziz A, Zaman K, Clemens J, Halle Julin C, Qadri F, Stene-Johansen K, Biswas R, Islam S, Rahman Bhuiyan T, Haque W, Sandbu S, Elahee ME, Ali M, Dembinski JL, Dudman S (2023)
    Immunogenicity and safety of a two-dose regimen with hepatitis E virus vaccine in healthy adults in rural Bangladesh: A randomized, double-blind, controlled, phase 2/pilot trial
    Vaccine, 41 (5), 1059-1066
    DOI 10.1016/j.vaccine.2022.12.064, PubMed 36599736
91. Özcan E, Vagolu SK, Gündüz MG, Stevanovic M, Kökbudak Z, Tønjum T, Nikodinovic-Runic J, Çetinkaya Y, Doğan ŞD (2023)
    Novel Quinoline-Based Thiosemicarbazide Derivatives: Synthesis, DFT Calculations, and Investigation of Antitubercular, Antibacterial, and Antifungal Activities
    ACS Omega, 8 (43), 40140-40152
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92. Ågnes C, Schwartz T, Quist-Paulsen E, Bhatti R, Njaastad AM, Fuglestved J, Wibetoe G (2023)
    Drug-induced aseptic meningitis
    Tidsskr Nor Laegeforen, 143 (1)
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Publications 2022

1. Akbari M, Nilsen HL, Montaldo NP (2022)
   Dynamic features of human mitochondrial DNA maintenance and transcription
   Front Cell Dev Biol, 10, 984245
   DOI 10.3389/fcell.2022.984245, PubMed 36158192
2. Ali O, Farooq A, Yang M, Jin VX, Bjørås M, Wang J (2022)
   abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis
   BMC Bioinformatics, 23 (1), 83
   DOI 10.1186/s12859-022-04615-z, PubMed 35240993
3. Avershina E, Frye SA, Ali J, Taxt AM, Ahmad R (2022)
   Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing
   Front Microbiol, 13, 822402
   DOI 10.3389/fmicb.2022.822402, PubMed 35369431
4. Bai X, Narayanan A, Skagerberg M, Ceña-Diez R, Giske CG, Strålin K, Sönnerborg A (2022)
   Characterization of the Upper Respiratory Bacterial Microbiome in Critically Ill COVID-19 Patients
   Biomedicines, 10 (5)
   DOI 10.3390/biomedicines10050982, PubMed 35625719
5. Bai X, Ylinen E, Zhang J, Salmenlinna S, Halkilahti J, Saxen H, Narayanan A, Jahnukainen T, Matussek A (2022)
   Comparative Genomics of Shiga Toxin-Producing Escherichia coli Strains Isolated from Pediatric Patients with and without Hemolytic Uremic Syndrome from 2000 to 2016 in Finland
   Microbiol Spectr, 10 (4), e0066022
   DOI 10.1128/spectrum.00660-22, PubMed 35730965
6. Barlinn R, Dudman SG, Rollag H, Trogstad L, Lindstrøm JC, Magnus P (2022)
   Maternal cytomegalovirus infection and delayed language development in children at 3 years of age-a nested case-control study in a large population-based pregnancy cohort
   PLoS One, 17 (12), e0278623
   DOI 10.1371/journal.pone.0278623, PubMed 36455052
7. Baruch J, Rojek A, Kartsonaki C, Vijayaraghavan BKT, Gonçalves BP, Pritchard MG, Merson L, Dunning J, Hall M, Sigfrid L, Citarella BW, Murthy S, Yeabah TO, Olliaro P, ISARIC Clinical Characterisation Group (2022)
   Symptom-based case definitions for COVID-19: Time and geographical variations for detection at hospital admission among 260,000 patients
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70. Oppen K, Ueland T, Michelsen AE, Aukrust P, Steinsvik T, Skadberg Ø, Brede C, Siljan WW, Husebye E, Holter JC, Heggelund L (2022)
    Hepcidin predicts 5-year mortality after community-acquired pneumonia
    Infect Dis (Lond), 54 (6), 403-409
    DOI 10.1080/23744235.2021.2022194, PubMed 35057702
71. Quiles-Jiménez A, Dahl TB, Bjørås M, Alseth I, Halvorsen B, Gregersen I (2022)
    Epitranscriptome in Ischemic Cardiovascular Disease: Potential Target for Therapies
    Stroke, 53 (6), 2114-2122
    DOI 10.1161/STROKEAHA.121.037581, PubMed 35240858
72. Ravlo E, Evensen L, Sanson G, Hildonen S, Ianevski A, Skjervold PO, Ji P, Wang W, Kaarbø M, Kaynova GD, Kainov DE, Bjørås M (2022)
    Antiviral Immunoglobulins of Chicken Egg Yolk for Potential Prevention of SARS-CoV-2 Infection
    Viruses, 14 (10)
    DOI 10.3390/v14102121, PubMed 36298676
73. Reyes LF, Murthy S, Garcia-Gallo E, Irvine M, Merson L, Martin-Loeches I, Rello J, Taccone FS, Fowler RA, Docherty AB, Kartsonaki C, Aragao I, Barrett PW, Beane A, Burrell A, Cheng MP, Christian MD, Cidade JP, Citarella BW, Donnelly CA, Fernandes SM, French C, Haniffa R, Harrison EM, Ho AYW et al. (2022)
    Clinical characteristics, risk factors and outcomes in patients with severe COVID-19 registered in the International Severe Acute Respiratory and Emerging Infection Consortium WHO clinical characterisation protocol: a prospective, multinational, multicentre, observational study
    ERJ Open Res, 8 (1)
    DOI 10.1183/23120541.00552-2021, PubMed 35169585
74. Reyes LF, Murthy S, Garcia-Gallo E, Merson L, Ibáñez-Prada ED, Rello J, Fuentes YV, Martin-Loeches I, Bozza F, Duque S, Taccone FS, Fowler RA, Kartsonaki C, Gonçalves BP, Citarella BW, Aryal D, Burhan E, Cummings MJ, Delmas C, Diaz R, Figueiredo-Mello C, Hashmi M, Panda PK, Jiménez MP, Rincon DFB et al. (2022)
    Respiratory support in patients with severe COVID-19 in the International Severe Acute Respiratory and Emerging Infection (ISARIC) COVID-19 study: a prospective, multinational, observational study
    Crit Care, 26 (1), 276
    DOI 10.1186/s13054-022-04155-1, PubMed 36100904
75. Rodriguez-Temporal D, Alcaide F, Mareković I, O'Connor JA, Gorton R, van Ingen J, Van den Bossche A, Héry-Arnaud G, Beauruelle C, Orth-Höller D, Palacios-Gutiérrez JJ, Tudó G, Bou G, Ceyssens PJ, Garrigó M, González-Martin J, Greub G, Hrabak J, Ingebretsen A, Mediavilla-Gradolph MC, Oviaño M, Palop B, Pranada AB, Quiroga L, Ruiz-Serrano MJ et al. (2022)
    Multicentre study on the reproducibility of MALDI-TOF MS for nontuberculous mycobacteria identification
    Sci Rep, 12 (1), 1237
    DOI 10.1038/s41598-022-05315-7, PubMed 35075208
76. Rognes T, Scheffer L, Greiff V, Sandve GK (2022)
    CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching
    Bioinformatics, 38 (17), 4230-4232
    DOI 10.1093/bioinformatics/btac505, PubMed 35852318
77. Rossini R, Kumar V, Mathelier A, Rognes T, Paulsen J (2022)
    MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions
    Genome Biol, 23 (1), 247
    DOI 10.1186/s13059-022-02815-7, PubMed 36451166
78. Schultz NH, Søraas AVL, Sørvoll IH, Akkök ÇA, Vetlesen A, Bhamra JS, Ahlen MT, Holme PA, Aamodt AH, Skagen K, Skattør TH, Skjelland M, Wiedmann MK (2022)
    Vaccine associated benign headache and cutaneous hemorrhage after ChAdOx1 nCoV-19 vaccine: A cohort study
    J Stroke Cerebrovasc Dis, 32 (1), 106860
    DOI 10.1016/j.jstrokecerebrovasdis.2022.106860, PubMed 36403363
79. SenGupta T, Lefol Y, Lirussi L, Suaste V, Luders T, Gupta S, Aman Y, Sharma K, Fang EF, Nilsen H (2022)
    Krill oil protects dopaminergic neurons from age-related degeneration through temporal transcriptome rewiring and suppression of several hallmarks of aging
    Aging (Albany NY), 14 (21), 8661-8687
    DOI 10.18632/aging.204375, PubMed 36367773
80. Siljan WW, Sivakumaran D, Ritz C, Jenum S, Ottenhoff TH, Ulvestad E, Holter JC, Heggelund L, Grewal HM (2022)
    Host Transcriptional Signatures Predict Etiology in Community-Acquired Pneumonia: Potential Antibiotic Stewardship Tools
    Biomark Insights, 17, 11772719221099130
    DOI 10.1177/11772719221099130, PubMed 35693251
81. Skjerven HK, Danielsen AS, Schlichting E, Sahlberg KK, Hofvind S (2022)
    Treatment of Ductal Carcinoma in situ: A Register-Based Study of Norwegian Women Diagnosed between 1995 and 2018
    Breast Care (Basel), 17 (5), 486-494
    DOI 10.1159/000524564, PubMed 36684407
82. Skjælaaen K, Nesvold H, Brekke M, Sare M, Landaas ET, Mdala I, Olsen AO, Vallersnes OM (2022)
    Sexually transmitted infections among patients attending a sexual assault centre: a cohort study from Oslo, Norway
    BMJ Open, 12 (12), e064934
    DOI 10.1136/bmjopen-2022-064934, PubMed 36456026
83. Starrfelt J, Danielsen AS, Buanes EA, Juvet LK, Lyngstad TM, Rø GØI, Veneti L, Watle SV, Meijerink H (2022)
    Age and product dependent vaccine effectiveness against SARS-CoV-2 infection and hospitalisation among adults in Norway: a national cohort study, July-November 2021
    BMC Med, 20 (1), 278
    DOI 10.1186/s12916-022-02480-4, PubMed 36050718
84. Starrfelt J, Danielsen AS, Kacelnik O, Wang Børseth A, Seppälä E, Meijerink H (2022)
    High vaccine effectiveness against coronavirus disease 2019 (COVID-19) and severe disease among residents and staff of long-term care facilities in Norway, November 2020-June 2021
    Antimicrob Steward Healthc Epidemiol, 2 (1), e10
    DOI 10.1017/ash.2021.246, PubMed 36310780
85. Su Z, Monshaugen I, Klungland A, Ougland R, Dutta A (2022)
    Characterization of novel small non-coding RNAs and their modifications in bladder cancer using an updated small RNA-seq workflow
    Front Mol Biosci, 9, 887686
    DOI 10.3389/fmolb.2022.887686, PubMed 35923465
86. Su Z, Monshaugen I, Wilson B, Wang F, Klungland A, Ougland R, Dutta A (2022)
    TRMT6/61A-dependent base methylation of tRNA-derived fragments regulates gene-silencing activity and the unfolded protein response in bladder cancer
    Nat Commun, 13 (1), 2165
    DOI 10.1038/s41467-022-29790-8, PubMed 35444240
87. Sui X, Klungland A, Gao L (2022)
    RNA m6A modifications in mammalian gametogenesis and pregnancy
    Reproduction, 165 (1), R1-R8
    DOI 10.1530/REP-22-0112, PubMed 36194446
88. Sumathipala D, Strømme P, Fattahi Z, Lüders T, Sheng Y, Kahrizi K, Einarsen IH, Sloan JL, Najmabadi H, van den Heuvel L, Wevers RA, Guerrero-Castillo S, Mørkrid L, Valayannopoulos V, Backe PH, Venditti CP, van Karnebeek CD, Nilsen H, Frengen E, Misceo D (2022)
    ZBTB11 dysfunction: spectrum of brain abnormalities, biochemical signature and cellular consequences
    Brain, 145 (7), 2602-2616
    DOI 10.1093/brain/awac034, PubMed 35104841
89. Syversen SW, Jyssum I, Tveter AT, Sexton J, Christensen IE, Tran TT, Bjørlykke KH, Mjaaland S, Warren DJ, Kvien TK, Chopra A, Kro GB, Jahnsen J, Munthe LA, Haavardsholm EA, Grødeland G, Vaage JT, Provan SA, Jørgensen KK, Goll GL (2022)
    Immunogenicity and safety of a three-dose SARS-CoV-2 vaccination strategy in patients with immune-mediated inflammatory diseases on immunosuppressive therapy
    RMD Open, 8 (2)
    DOI 10.1136/rmdopen-2022-002417, PubMed 36328399
90. Syversen SW, Jyssum I, Tveter AT, Tran TT, Sexton J, Provan SA, Mjaaland S, Warren DJ, Kvien TK, Grødeland G, Nissen-Meyer LSH, Ricanek P, Chopra A, Andersson AM, Kro GB, Jahnsen J, Munthe LA, Haavardsholm EA, Vaage JT, Lund-Johansen F, Jørgensen KK, Goll GL (2022)
    Immunogenicity and Safety of Standard and Third-Dose SARS-CoV-2 Vaccination in Patients Receiving Immunosuppressive Therapy
    Arthritis Rheumatol, 74 (8), 1321-1332
    DOI 10.1002/art.42153, PubMed 35507355
91. Søraas A, Grødeland G, Granerud BK, Ueland T, Lind A, Fevang B, Murphy SL, Huse C, Nygaard AB, Steffensen AK, Al-Baldawi H, Holberg-Petersen M, Andresen LL, Ågnes C, Ranheim T, Schanke Y, Istre M, Dahl JA, Chopra A, Dudman S, Kaarbø M, Andersen JT, Vaage EB, Tran TT, Vaage JT et al. (2022)
    Breakthrough infections with the omicron and delta variants of SARS-CoV-2 result in similar re-activation of vaccine-induced immunity
    Front Immunol, 13, 964525
    DOI 10.3389/fimmu.2022.964525, PubMed 36159859
92. Søvik S, Barrat-Due A, Kåsine T, Olasveengen T, Strand MW, Tveita AA, Berdal JE, Lehre MA, Lorentsen T, Heggelund L, Stenstad T, Ringstad J, Müller F, Aukrust P, Holter JC, Nordøy I (2022)
    Corticosteroids and superinfections in COVID-19 patients on invasive mechanical ventilation
    J Infect, 85 (1), 57-63
    DOI 10.1016/j.jinf.2022.05.015, PubMed 35605805
93. Tapera M, Kekeçmuhammed H, Sahin K, Vagolu SK, Lherbet C, Homberset H, Chebaiki M, Tønjum T, Mourey L, Zorlu Y, Durdagi S, Sarıpınar E (2022)
    Synthesis, characterization, anti-tuberculosis activity and molecular modeling studies of thiourea derivatives bearing aminoguanidine moiety
    Journal of Molecular Structure, 1270, 133899
    DOI 10.1016/j.molstruc.2022.133899, PublikaID 421
94. Tran TT, Vaage EB, Mehta A, Chopra A, Tietze L, Kolderup A, Anthi A, König M, Nygaard G, Lind A, Müller F, Nissen-Meyer LS, Magnus P, Trogstad L, Mjaaland S, Søraas A, Midtvedt K, Åsberg A, Barratt-Due A, Medhus AW, Høivik ML, Lundin K, Karlsen RF, Dahle R, Danielsson K et al. (2022)
    Titers of antibodies against ancestral SARS-CoV-2 correlate with levels of neutralizing antibodies to multiple variants
    NPJ Vaccines, 7 (1), 174
    DOI 10.1038/s41541-022-00586-7, PubMed 36585405
95. Trøseid M, Dahl TB, Holter JC, Kildal AB, Murphy SL, Yang K, Quiles-Jiménez A, Heggelund L, Müller KE, Tveita A, Michelsen AE, Bøe S, Holten AR, Hoel H, Mathiessen A, Aaløkken TM, Fevang B, Granerud BK, Tonby K, Henriksen KN, Lerum TV, Müller F, Skjønsberg OH, Barratt-Due A, Dyrhol-Riise AM et al. (2022)
    Persistent T-cell exhaustion in relation to prolonged pulmonary pathology and death after severe COVID-19: Results from two Norwegian cohort studies
    J Intern Med, 292 (5), 816-828
    DOI 10.1111/joim.13549, PubMed 35982589
96. Tveita A, Murphy SL, Holter JC, Kildal AB, Michelsen AE, Lerum TV, Kaarbø M, Heggelund L, Holten AR, Finbråten AK, Müller KE, Mathiessen A, Bøe S, Fevang B, Granerud BK, Tonby K, Lind A, Dudman SG, Henriksen KN, Müller F, Skjønsberg OH, Trøseid M, Barratt-Due A, Dyrhol-Riise AM, Aukrust P et al. (2022)
    High Circulating Levels of the Homeostatic Chemokines CCL19 and CCL21 Predict Mortality and Disease Severity in COVID-19
    J Infect Dis, 226 (12), 2150-2160
    DOI 10.1093/infdis/jiac313, PubMed 35876699
97. Umu SU, Rapp Vander-Elst K, Karlsen VT, Chouliara M, Bækkevold ES, Jahnsen FL, Domanska D (2022)
    Cellsnake: a user-friendly tool for single-cell RNA sequencing analysis
    Gigascience, 12
    DOI 10.1093/gigascience/giad091, PubMed 37889009
98. Van der Auwera G, Davidsson L, Buffet P, Ruf MT, Gramiccia M, Varani S, Chicharro C, Bart A, Harms G, Chiodini PL, Brekke H, Robert-Gangneux F, Cortes S, Verweij JJ, Scarabello A, Karlsson Söbirk S, Guéry R, van Henten S, Di Muccio T, Carra E, van Thiel P, Vandeputte M, Gaspari V, Blum J, LeishMan Surveillance network et al. (2022)
    Surveillance of leishmaniasis cases from 15 European centres, 2014 to 2019: a retrospective analysis
    Euro Surveill, 27 (4)
    DOI 10.2807/1560-7917.ES.2022.27.4.2002028, PubMed 35086613
99. Viprey VF, Davis GL, Benson AD, Ewin D, Spittal W, Vernon JJ, Rupnik M, Banz A, Allantaz F, Cleuziat P, COMBACTE-CDI National Coordinators, Wilcox MH, Davies KA, COMBACTE-CDI consortium, Members of the COMBACTE-CDI National coordinators (2022)
    A point-prevalence study on community and inpatient Clostridioides difficile infections (CDI): results from Combatting Bacterial Resistance in Europe CDI (COMBACTE-CDI), July to November 2018
    Euro Surveill, 27 (26)
    DOI 10.2807/1560-7917.ES.2022.27.26.2100704, PubMed 35775426
100. Wainstein M, MacDonald S, Fryer D, Young K, Balan V, Begum H, Burrell A, Citarella BW, Cobb JP, Kelly S, Kennon K, Lee J, Merson L, Murthy S, Nichol A, Semple MG, Strudwick S, Webb SA, Rossignol P, Claure-Del Granado R, Shrapnel S, ISARIC Clinical Characterisation Group (2022)
     Use of an extended KDIGO definition to diagnose acute kidney injury in patients with COVID-19: A multinational study using the ISARIC-WHO clinical characterisation protocol
     PLoS Med, 19 (4), e1003969
     DOI 10.1371/journal.pmed.1003969, PubMed 35442972
101. Whyte CE, Singh K, Burton OT, Aloulou M, Kouser L, Veiga RV, Dashwood A, Okkenhaug H, Benadda S, Moudra A, Bricard O, Lienart S, Bielefeld P, Roca CP, Naranjo-Galindo FJ, Lombard-Vadnais F, Junius S, Bending D, Ono M, Hochepied T, Halim TYF, Schlenner S, Lesage S, Dooley J, Liston A (2022)
     Correction: Context-dependent effects of IL-2 rewire immunity into distinct cellular circuits
     J Exp Med, 219 (8)
     DOI 10.1084/jem.2021239107142022c, PubMed 35878878
102. Wæhre T, Tunheim G, Bodin JE, Laake I, Kvale D, Kran AB, Brekke H, Løken R, Oftung F, Mjaaland S, Dyrhol-Riise AM (2022)
     Clinical characteristics and outcomes in hospitalized adult influenza patients: an observational study from Norway 2014-2018
     Infect Dis (Lond), 54 (5), 367-377
     DOI 10.1080/23744235.2021.2022196, PubMed 34983302
103. Yang X, Liu Q, Bai X, Hu B, Jiang D, Jiao H, Lu L, Fan R, Hou P, Matussek A, Xiong Y (2022)
     High Prevalence and Persistence of Escherichia coli Strains Producing Shiga Toxin Subtype 2k in Goat Herds
     Microbiol Spectr, 10 (4), e0157122
     DOI 10.1128/spectrum.01571-22, PubMed 35938860
104. Yang X, Liu Q, Sun H, Xiong Y, Matussek A, Bai X (2022)
     Genomic Characterization of Escherichia coli O8 Strains Producing Shiga Toxin 2l Subtype
     Microorganisms, 10 (6)
     DOI 10.3390/microorganisms10061245, PubMed 35744763
105. Zhao X, Hendriks IA, Le Gras S, Ye T, Ramos-Alonso L, Nguéa P A, Lien GF, Ghasemi F, Klungland A, Jost B, Enserink JM, Nielsen ML, Chymkowitch P (2022)
     Waves of sumoylation support transcription dynamics during adipocyte differentiation
     Nucleic Acids Res, 50 (3), 1351-1369
     DOI 10.1093/nar/gkac027, PubMed 35100417
106. Ørstavik K, Arntzen KA, Mathisen P, Backe PH, Tangeraas T, Rasmussen M, Kristensen E, Van Ghelue M, Jonsrud C, Bliksrud YT (2022)
     Novel mutations in the HADHB gene causing a mild phenotype of mitochondrial trifunctional protein (MTP) deficiency
     JIMD Rep, 63 (3), 193-198
     DOI 10.1002/jmd2.12276, PubMed 35433169
107. Øverbø J, Aziz A, Zaman K, Julin CH, Qadri F, Stene-Johansen K, Biswas R, Islam S, Bhuiyan TR, Haque W, Sandbu S, Dembinski JL, Dudman S (2022)
     Stability and Feasibility of Dried Blood Spots for Hepatitis E Virus Serology in a Rural Setting
     Viruses, 14 (11)
     DOI 10.3390/v14112525, PubMed 36423134

Publications 2021

1. Ahmadi A, Till K, Backe PH, Blicher P, Diekmann R, Schüttpelz M, Glette K, Tørresen J, Bjørås M, Rowe AD, Dalhus B (2021)
   Non-flipping DNA glycosylase AlkD scans DNA without formation of a stable interrogation complex
   Commun Biol, 4 (1), 876
   DOI 10.1038/s42003-021-02400-x, PubMed 34267321
2. Al Rubaye MTS, Janice J, Bjørnholt JV, Jakovljev A, Hultström ME, Sundsfjord A, Hegstad K (2021)
   Novel genomic islands and a new vanD-subtype in the first sporadic VanD-type vancomycin resistant enterococci in Norway
   PLoS One, 16 (7), e0255187
   DOI 10.1371/journal.pone.0255187, PubMed 34297779
3. Alexeeva M, Moen MN, Xu XM, Rasmussen A, Leiros I, Kirpekar F, Klungland A, Alsøe L, Nilsen H, Bjelland S (2021)
   Intrinsic Strand-Incision Activity of Human UNG: Implications for Nick Generation in Immunoglobulin Gene Diversification
   Front Immunol, 12, 762032
   DOI 10.3389/fimmu.2021.762032, PubMed 35003074
4. Andersen E, Chollet ME, Sletten M, Stavik B, Skarpen E, Backe PH, Thiede B, Glosli H, Henriksson CE, Iversen N (2021)
   Molecular Characterization of Two Homozygous Factor VII Variants Associated with Intracranial Bleeding
   Thromb Haemost, 121 (12), 1588-1598
   DOI 10.1055/a-1450-8568, PubMed 33742435
5. Aprigliano R, Aksu ME, Bradamante S, Mihaljevic B, Wang W, Rian K, Montaldo NP, Grooms KM, Fordyce Martin SL, Bordin DL, Bosshard M, Peng Y, Alexov E, Skinner C, Liabakk NB, Sullivan GJ, Bjørås M, Schwartz CE, van Loon B (2021)
   Increased p53 signaling impairs neural differentiation in HUWE1-promoted intellectual disabilities
   Cell Rep Med, 2 (4), 100240
   DOI 10.1016/j.xcrm.2021.100240, PubMed 33948573
6. Avershina E, Sharma P, Taxt AM, Singh H, Frye SA, Paul K, Kapil A, Naseer U, Kaur P, Ahmad R (2021)
   AMR-Diag: Neural network based genotype-to-phenotype prediction of resistance towards β-lactams in Escherichia coli and Klebsiella pneumoniae
   Comput Struct Biotechnol J, 19, 1896-1906
   DOI 10.1016/j.csbj.2021.03.027, PubMed 33897984
7. Bai X, Narayanan A, Nowak P, Ray S, Neogi U, Sönnerborg A (2021)
   Whole-Genome Metagenomic Analysis of the Gut Microbiome in HIV-1-Infected Individuals on Antiretroviral Therapy
   Front Microbiol, 12, 667718
   DOI 10.3389/fmicb.2021.667718, PubMed 34248876
8. Bai X, Scheutz F, Dahlgren HM, Hedenström I, Jernberg C (2021)
   Characterization of Clinical Escherichia coli Strains Producing a Novel Shiga Toxin 2 Subtype in Sweden and Denmark
   Microorganisms, 9 (11)
   DOI 10.3390/microorganisms9112374, PubMed 34835499
9. Bai X, Zhang J, Hua Y, Jernberg C, Xiong Y, French N, Löfgren S, Hedenström I, Ambikan A, Mernelius S, Matussek A (2021)
   Genomic Insights Into Clinical Shiga Toxin-Producing Escherichia coli Strains: A 15-Year Period Survey in Jönköping, Sweden
   Front Microbiol, 12, 627861
   DOI 10.3389/fmicb.2021.627861, PubMed 33613494
10. Balaban G, Grytten I, Rand KD, Scheffer L, Sandve GK (2021)
    Ten simple rules for quick and dirty scientific programming
    PLoS Comput Biol, 17 (3), e1008549
    DOI 10.1371/journal.pcbi.1008549, PubMed 33705383
11. Barratt-Due A, Olsen IC, Nezvalova-Henriksen K, Kåsine T, Lund-Johansen F, Hoel H, Holten AR, Tveita A, Mathiessen A, Haugli M, Eiken R, Kildal AB, Berg Å, Johannessen A, Heggelund L, Dahl TB, Skåra KH, Mielnik P, Le LAK, Thoresen L, Ernst G, Hoff DAL, Skudal H, Kittang BR, Olsen RB et al. (2021)
    Evaluation of the Effects of Remdesivir and Hydroxychloroquine on Viral Clearance in COVID-19 : A Randomized Trial
    Ann Intern Med, 174 (9), 1261-1269
    DOI 10.7326/M21-0653, PubMed 34251903
12. Benschop KSM, Broberg EK, Hodcroft E, Schmitz D, Albert J, Baicus A, Bailly JL, Baldvinsdottir G, Berginc N, Blomqvist S, Böttcher S, Brytting M, Bujaki E, Cabrerizo M, Celma C, Cinek O, Claas ECJ, Cremer J, Dean J, Dembinski JL, Demchyshyna I, Diedrich S, Dudman S, Dunning J, Dyrdak R et al. (2021)
    Molecular Epidemiology and Evolutionary Trajectory of Emerging Echovirus 30, Europe
    Emerg Infect Dis, 27 (6), 1616-1626
    DOI 10.3201/eid2706.203096, PubMed 34013874
13. Bjørkto MH, Barratt-Due A, Nordøy I, Dörje C, Galteland E, Lind A, Hilli A, Aukrust P, Mjøen G (2021)
    The use of eculizumab in Capnocytophaga canimorsus associated thrombotic microangiopathy: a case report
    BMC Infect Dis, 21 (1), 137
    DOI 10.1186/s12879-021-05789-2, PubMed 33526010
14. Blindheim FH, Malme AT, Dalhus B, Sundby E, Hoff BH (2021)
    Synthesis and Evaluation of Fused Pyrimidines as E. coli Thymidylate Monophosphate Kinase Inhibitors
    ChemistrySelect, 6 (45), 12852-12857
    DOI 10.1002/slct.202103796
15. Blom KB, Åsberg A, Sjaastad I, Kalleberg KT, Søraas A, Midtvedt K, Birkeland JA (2021)
    Kidney Transplant Recipient Behavior During the Early COVID-19 Pandemic: A National Survey Study in Norway
    Kidney Med, 4 (2), 100389
    DOI 10.1016/j.xkme.2021.09.006, PubMed 34805967
16. Borud EK, Nakstad ER, Håberg SE, Lind A, Fadum EA, Taxt AM, Steens A, Gjein GE, Sunde MW, Iversen P, Svanevik M, Ahmad BM, Waldow T, Norheim AJ (2021)
    Severe acute respiratory syndrome coronavirus 2 prevalence in 1170 asymptomatic Norwegian conscripts
    Health Sci Rep, 4 (1), e233
    DOI 10.1002/hsr2.233, PubMed 33490637
17. Brandal LT, MacDonald E, Veneti L, Ravlo T, Lange H, Naseer U, Feruglio S, Bragstad K, Hungnes O, Ødeskaug LE, Hagen F, Hanch-Hansen KE, Lind A, Watle SV, Taxt AM, Johansen M, Vold L, Aavitsland P, Nygård K, Madslien EH (2021)
    Outbreak caused by the SARS-CoV-2 Omicron variant in Norway, November to December 2021
    Euro Surveill, 26 (50)
    DOI 10.2807/1560-7917.ES.2021.26.50.2101147, PubMed 34915975
18. Bruun T, Salamanca BV, Bekkevold T, Døllner H, Gibory M, Gilje AM, Haarr E, Kran AB, Leegaard TM, Nakstad B, Nordbø SA, Rojahn A, Størdal K, Flem E, Norwegian Enhanced Pediatric Immunisation Surveillance Network (2021)
    Impact of the Rotavirus Vaccination Program in Norway After Four Years With High Coverage
    Pediatr Infect Dis J, 40 (4), 368-374
    DOI 10.1097/INF.0000000000003020, PubMed 33399430
19. Carlson CR, Aronsen JM, Bergan-Dahl A, Moutty MC, Lunde M, Lunde PK, Jarstadmarken H, Wanichawan P, Pereira L, Kolstad TRS, Dalhus B, Subramanian H, Hille S, Christensen G, Müller OJ, Nikolaev V, Bers DM, Sjaastad I, Shen X, Louch WE, Klussmann E, Sejersted OM (2021)
    AKAP18δ Anchors and Regulates CaMKII Activity at Phospholamban-SERCA2 and RYR
    Circ Res, 130 (1), 27-44
    DOI 10.1161/CIRCRESAHA.120.317976, PubMed 34814703
20. Christensen EE, Jørgensen MJ, Nore KG, Dahl TB, Yang K, Ranheim T, Huse C, Lind A, Nur S, Stiksrud B, Jenum S, Tonby K, Holter JC, Holten AR, Halvorsen B, Dyrhol-Riise AM (2021)
    Critical COVID-19 is associated with distinct leukocyte phenotypes and transcriptome patterns
    J Intern Med, 290 (3), 677-692
    DOI 10.1111/joim.13310, PubMed 34080738
21. COVID-19 Host Genetics Initiative (2021)
    Mapping the human genetic architecture of COVID-19
    Nature, 600 (7889), 472-477
    DOI 10.1038/s41586-021-03767-x, PubMed 34237774
22. de Sousa MML, Ye J, Luna L, Hildrestrand G, Bjørås K, Scheffler K, Bjørås M (2021)
    Impact of Oxidative DNA Damage and the Role of DNA Glycosylases in Neurological Dysfunction
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